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Title:Molecular architecture of the multiprotein splicing factor SF3b.
Authors:M.M. Golas, B. Sander, C.L. Will, R. Luhrmann, H. Stark
Sample:SF3b, multiprotein splicing factor
Aggregation state:Single particle (9.7 angstroms resolution)
Red flagLatest update:2011-05-26
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Sample
Sample name: SF3b, multiprotein splicing factor
Oligomeric state: monomer
Theoretical molecular weight of the sample: 0.45
Components:
ID Type Name Exp. MW (MDa) Oligomeric details Recombinant expression Synthetic Organism GO identifier InterPro identifier Virus identifier Details
1proteinsplicing related proteins0.45MonomerfalseHomo sapiens
Experiment
Sample preparation:
pHSample conc.DetailsStainingSample support details
7.90.05 mg/mL20 mM Hepes, 600 mM KCl, 1.5 mM Mg2 Cl2, 5% glycerol, 0.5 mM DTT, 0.5 mM PMSFThe SF3b complexes were sandwiched in 2% uranyl formate between two layers of thin carbon using a perforated carbon grid as support. After 2 min at RT, the sample was frozen in liquid nitrogen.200 mesh copper grid
Vitrification:
Cryogen nameHumidityTemp.Instr.MethodTime resolvedDetails
NITROGEN% K ms
Imaging:
MicroscopeVoltageIllumination modeImaging modeCs:Defocus min.Defocus max.Nominal mag.Calibrated mag.Electron sourceDetectorDetector distanceAstigmatism
FEI/PHILIPS CM200FEG200 kVFLOOD BEAMBRIGHT FIELD2 mm150 nm1500 nm5000049500FIELD EMISSION GUNKodak SO163 mm175,000 times magnification

Specimen holderHolder modelTilt min.Tilt max.Energy filterEnergy windowTemp.Temp. min.Temp. max.Beam tiltElectron doseOther detailsDate
side entry cryo holderGATAN LIQUID NITROGEN°° eV93 K K K mrad20 e/Å2
Processing
Software:Imagic
CTF correction:Each particle
Resolution by author:9.7 Å
Resolution method:FSC at 0.5 cut-off
Unit cell:
Scanned images:
Num. imagesSampling sizeOD rangeQuant. bit numberOther detailsScanner
374 μm/pixel8linkPRIMESCAN
Fitting:
PDBProtocolTarget crit.SoftwareB valueFitting spacePDB chainDetails
Situs, Amira28
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