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Title:
Nucleotide-dependent bending flexibility of tubulin regulates microtubule assembly.
Authors:
Wang HW, Nogales E
Sample:
GMPCPP-tubulin
Aggregation state:
Helical (18 angstroms resolution)
Latest update:
2011-05-26
Summary
Experimental details
Visualization
Map information
Downloads
Sample
Sample name:
GMPCPP-tubulin
Components:
ID
Type
Name
Exp. MW (MDa)
Oligomeric details
Recombinant expression
Synthetic
Organism
GO identifier
InterPro identifier
Virus identifier
Details
1
protein
tubulin
0.11
dimer
false
Experiment
Sample preparation:
pH
Sample conc.
Details
Staining
Sample support details
6.8
2.0 mg/mL
80 mM PIPES, 1 mM EGTA, 0.5 mM GMPCPP, 20 mM MgCl2
400 mesh Quantifoil grid
Vitrification:
Cryogen name
Humidity
Temp.
Instr.
Method
Time resolved
Details
ETHANE
100%
90 K
FEI VITROBOT
Blot for 1.8 seconds before plunging with the Vitrobot offset set as -2 mm.
ms
Vitrification instrument: Vitrobot
Imaging:
Microscope
Voltage
Illumination mode
Imaging mode
Cs:
Defocus min.
Defocus max.
Nominal mag.
Calibrated mag.
Electron source
Detector
Detector distance
Astigmatism
FEI/PHILIPS CM200FEG
200 kV
FLOOD BEAM
BRIGHT FIELD
2.2 mm
800 nm
2000 nm
38000
38000
FIELD EMISSION GUN
Kodak SO163 film
mm
objective lens astigmatism was corected at 200K mag
Specimen holder
Holder model
Tilt min.
Tilt max.
Energy filter
Energy window
Temp.
Temp. min.
Temp. max.
Beam tilt
Electron dose
Other details
Date
Eucentric
GATAN LIQUID NITROGEN
°
°
eV
90 K
K
K
mrad
15 e/Å
2
2004-12-23
Processing
Software:
Phoelix and MRC
CTF correction:
each image
Resolution by author:
18 Å
Resolution method:
layer line with signal-to-noise ratio higher than 2.0
Processing details:
Final map was calculated from two tube images
Unit cell:
Scanned images:
Num. images
Sampling size
OD range
Quant. bit number
Other details
Scanner
40
12.7 μm/pixel
14
link
OTHER
Fitting:
PDB
Protocol
Target crit.
Software
B value
Fitting space
PDB chain
Details