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Title:
Negative structure of open and closed conformation of crm1
Authors:
Monecke T, Haselbach D, Neumann P, Thomson E, Hurt E, Stark H, Dickmanns A, Ficner R
Sample:
crm1 open conformation
Method:
Single particle reconstruction (18 angstroms resolution)
Summary
Experimental details
Visualization
Map information
Downloads
Sample
Sample name:
crm1 open conformation
Oligomeric state:
monomer
Theoretical molecular weight of the sample:
0.12
Components:
ID
Type
Name
Exp. MW (MDa)
Oligomeric details
Recombinant expression
Synthetic
Organism
UniProt identifier
GO identifier
InterPro identifier
Virus identifier
Details
1
protein
crm1
monomer
true
Chaetomium thermophilum
Experiment
Specimen state:
Particle
Specimen preparation:
pH
Specimen conc.
Details
Staining
Specimen support details
7.5
mg/mL
150 mM NaCl, 20 mM HEPES/NaOH pH 7.5, 2 mM MgCl2, 4 mM DTT
Grids with adsorbed protein floated on 1% w/v uranyl formate for 60 seconds
200 mesh copper grid with thin carbon support, freshly floated on protein solution
Vitrification:
Cryogen name
Humidity
Temp.
Instr.
Method
Time resolved
Details
NONE
%
K
NONE
ms
Imaging:
Microscope
Voltage
Illumination mode
Imaging mode
Cs
Defocus min.
Defocus max.
Nominal mag.
Calibrated mag.
Electron source
Detector
Detector distance
Astigmatism
FEI/PHILIPS CM200FEG
160 kV
SPOT SCAN
BRIGHT FIELD
mm
nm
nm
155000
FIELD EMISSION GUN
TVIPS 4x4k CCD camera
mm
Specimen holder
Holder model
Tilt min.
Tilt max.
Energy filter
Energy window
Temp.
Temp. min.
Temp. max.
Beam tilt
Electron dose
Other details
Date
OTHER
°
°
eV
298 K
K
K
mrad
e/Å
2
21-MAR-2012
Processing
Protocol:
Cross-common-lines
Software:
imagic
CTF correction:
each particle
Number of particles:
21000
Resolution by author:
18 Å
Resolution method:
FSC at 0.5 cut-off
Scanned images:
Num. images
Sampling size
OD range
Quant. bit number
Other details
Scanner
300
μm/pixel
Fitting:
PDB
Protocol
Target crit.
Software
B value
Fitting space
PDB chain
Details